Monkeys, typewriters, and the origin of life

You’ve heard it before: “This is as likely as a monkey sitting on a typewriter writing Shakespeare.” It sounds very unlikely but . . . how unlikely, exactly? In this article, I go through the math and use the result to estimate how likely it is for life to have arisen spontaneously out of a primordial soup of chemicals.

I won’t bore you with how this whole trope of monkeys and typewriters came about. It has been used for quite a long time (that’s why typewriters, not laptops, are mentioned) and Wikipedia has a couple excellent articles on it. I’d start with this one. Succinctly, the most popular version says that an infinite number of monkeys typing randomly for an infinite time can produce any work of literature, because the probability of getting it right, even if small, is not zero, and they have unlimited time. The original version, attributed to Émile Borel, referred to the probability of a substance departing momentarily from its most probably thermodynamic macrostate, even for a short time. Borel described it in terms of thousands of monkeys typing complete libraries in his 1919 essay Mécanique Statistique et Irréversibilité.

But again, can we get a number, please? Here’s my shot at calculating the probability of our simian friend typing the Gutenberg.org version of “Hamlet.”

After removal of its header and the legal gobbledygook at the end, the Gutenberg.org text version of “Hamlet” contains 144048 non-space characters, 172957 including spaces, 3266 paragraphs including 4690 lines. Characters include all 26 letters, small case and uppercase, plus these punctuation signs: !()-;:'”,.? totaling 11 additional characters, plus spaces and newlines (not counted). We understand that spaces will be necessary, as well as carriage returns at the end of each line, for a total of 172957 + 4690 = 177647 characters. We have to discount 384 underscores that are unnecessary. Brackets are assumed to be identical to parentheses. There is one Latin diphthong, to be split as two letters. No numerals. Thus, the total character count is: 177647 – 384 = 177263. The number of different characters, including spaces and linefeeds, is 26×2 + 11 + 2 = 65, but this is not going to matter for our calculation.

My American English keyboard contains 46 main keys, plus 46 more after shifting, plus space and carriage return, for a total of 94, including all the above mentioned characters plus some that don’t appear in Hamlet. Every time the monkey presses a key, it has to be the right one, so that gives a probability 1/94 to the power 177263 for “Hamlet” to be the result.

My calculator overflows trying to compute this number, so here’s a trick. I can multiply and divide by 100, so the number becomes (100/94)^177263 * 100^(-177263). Unfortunately, the first factor is still indigestible to the calculator, so we need to split it, this way:
((100/94)^1000)^177 * (100/94)^263 * 10 ^(-177263 * 2) = (7.44983*10^26)^177 * 11678162.2 * 10^(-354526) = 7.44983^177 * 10^4602 * 1.16781622 * 10^7 * 10^(-354526) = 2.3437224 * 10^154 * 1.16781622 * 10^(4602 + 7 – 354526) = 2.73708 * 10^(-349763)

Another way to get the number is through the use of logarithms. The decimal logarithm of the number we’re looking for would be – 177263 * log10(94) = – 177263 * 1.973128 = – 349762.562713. Raising 10 to this exponent we obtain 10^(1 – 0.562713 – 349763) = 10^0.437287 * 10^(-349763) = 2.73708 * 10^(-349763), same as before.

In linear form, this would be zero, point, then 349762 zeros, and then 273708. Quite a bit to write. If we assume that one page of printed numbers will have roughly 1250 characters (250 words * 5 characters per word), it would take 280 pages to write it, all but the last filled with zeros, making a book longer than “Hamlet” itself.

But maybe we can get a clean copy faster with a whole bunch of monkeys teaming up to produce it. Assuming we have a monkey sitting on every atom in the universe (10^80 of them according to recent estimates), cranking out a full copy one million times per second (these monkeys are pretty fast typists, thanks to an endless supply of Coca-Cola), it would take 1/2.737 * 10^(349763 – 80 – 6) = 3.654 * 10^349676 seconds, or roughly 1.56 * 10^349669 years, which is about 8.4 * 10^349658 times the age of the universe (currently estimated at 13.77 billion years). Sorry, teamwork. I don’t think anyone, not even the Coca-Cola company, would invest in this venture.

So, yes, this is a very small probability. But it is still rather large compared to the probability of a tepid cup of coffee getting hotter where you drink it (at the expense of getting cooler away from that spot) for only a microsecond, which is what Borel wanted to illustrate. This is not impossible, but it would take a whole army of monkeys on typewriters cranking out all the major works of Western literature without flaw or error.

Now that we have a number and a process to arrive at it, maybe we can apply this to some other situation of interest. One of them is the origin of life on earth (or wherever, if life came here riding an asteroid, as some have suggested). Granted that Darwinian evolution can cause living beings to differentiate and become more sophisticated over time, there is still the problem that the first living organism, which cannot possibly have evolved from a previous non-living entity because evolution requires life, seems to have been itself quite complex (note: there’s speculation about “evolution” of molecules in the non-living prebiotic world, but this is not Darwinian evolution). Ongoing research on the subject has posited the existence of a single-cell progenitor of all life currently here, named Last Universal Common Ancestor, LUCA for short. Now, this may or may not be the first cell. It seems, however, that the lineage of all other contemporary competitors of LUCA has become extinct. The estimate is that LUCA’s genome contained at least 355 genes, because this is how many different proteins seem to have been present in its tiny body, all of them having survived, more or less mutated, to our day. It seems that LUCA had DNA (could have been RNA, but this makes little difference) hundreds of thousands of base pairs long.

Perhaps a better estimate of the first living cell’s complexity can be obtained by removing genetic material from a modern cell and seeing what we can get away with before the cell, or its lineage, is no longer alive. Of course, it is not likely that we would chance into anything resembling the historical first living cell by following this method (among other things because the earth’s environment back then was very different from what today is an environment friendly to life), but maybe we’ll get a good estimate of its complexity, since the first living cell had to perform pretty much the same functions in order to stay alive and pass on the trick to its descendants. There’s an excellent Wikipedia article on Minimal Genome that discusses the history of this effort, which has been going on for several decades. The current minimum genome champion, a synthetic cell named JCVI-syn3A, has a genome consisting of 543 kbp in 493 genes. The logic unit here is the “base pair” (bp for short), which is equivalent to 2 binary bits because the base pair language is base-4. Here our monkey would have a typewriter with only four keys: A, G, C, T, corresponding to the four bases. The probability of getting the syn3A genome right in a single typing session is therefore 1/4^543000. The decimal logarithm of this probability is -log10(4) * 543000 = -0.60206 * 543000 = -326918.575291. Raising 10 to this power in order to reconstruct the probability we get 10^(-326918.575291) = 10^(1 – 0.575291 – 326919) = 10^0.424709 * 10^(-326919) = 2.659 * 10^(-326919)

This is actually a lot easier to type than a singe copy of Hamlet. How much easier? 2.73708 * 10^(-349763) / 2.659 * 10^(-326919) = 1.0294 * 10^22844 times, that is, gazillions and gazillions of times easier. Which isn’t saying much, actually. Because if we put our team of highly caffeinated primates on this task, they still take quite a while. To be exact, 1/2.659 * 10^(326919 – 80 – 6) = 3.3761 * 10^326832 seconds, or roughly 8.655 * 10^326814 times the age of the universe.

These chances are not unlike those of getting a car to reassemble from its loose parts by throwing them in a bin and shaking. Except that car parts might snap together one by one when they align correctly, whereas there’s no good reason why segments of a partly correct genome might remain in their happenstance positions in the absence of natural selection rewarding them.

 

2 thoughts to “Monkeys, typewriters, and the origin of life”

  1. Smaller genomes than that of JCVI-syn3A occur in nature. The smallest known bacterial genome is 112 kbp, and even smaller genomes have been found for intra-cellular organelles and non-cellular organisms: 16.6 kbp for mitochondria, 1.8 kbp for porcine circovirus and around 200 bases for viroids and virusoids.

    Among synthetic genomes, Spiegelman’s Monster has 218 bases and Evolutionary Product 1 (EP1) just 48: https://link.springer.com/article/10.1023/A:1006501326129

    As you know, the time it takes for your highly caffeinated primates to type out a correct genome varies enormously according to genome size: even a genome as small as 200 bases would take them many times the age of the universe, whereas they’d type out a correct genome of 150 bases in less than 6 hours.

    Of course, none of these organisms with a couple of hundred bases or fewer can self-replicate, but if you add an appropriate enzyme to replicate them, then natural selection kicks in and you no longer have to rely on random chance.

    Finally, your analysis assumes only one correct genome for a given size, which clearly isn’t accurate. In terms of the monkey analogy, there’s no need for them to reproduce Hamlet – any comprehensible story, however simple, will do. It could even have a fair few typos.

    (Follow-up reply sent via email, added by prgomez):
    The bacterium with the smallest know genome is Nasuia Deltocephanicola: https://en.wikipedia.org/wiki/Nasuia_deltocephalinicola

    However, it’s an obligate endosymbiont of leafhoppers, so it has the same problem as viruses, viroids and virusoids that it can’t survive and reproduce on its own. As far as I can tell, all the smallest bacterial genomes seem to belong to symbionts.

    Now that I think of it, perhaps the most likely candidate for the first organism isn’t a tiny genome but rather a somewhat larger genome with a very small number of essential bases or base pairs. For example, if we assume that the 543 kbp of JCVI-syn3A is roughly the minimum number of essential base pairs for a free-living bacterium, wouldn’t it be more likely that these base pairs first formed within a genome of, say, the 4.6 Mbp of E. coli? In that case, to use the monkey analogy again, 12 % of a book would contain a comprehensible story, while the remaining 88 % would be meaningless gobbledegook. The story would be split into many short snippets interspersed randomly throughout the sea of gobbledegook. Surely that would give the monkeys a better chance.

    The other thing that increases the probability is the fact that in your 1/4^543000, the numerator shouldn’t be 1 but rather the number of combinations that produce a viable organism, which might be quite high. The biggest question is whether the first “viable organism” was something like a bacterium that could self-replicate or something much simpler like a viroid, a virusoid, Spiegelman’s Monster or EP1 that arose together with a suitable enzyme for replicating it.

    1. Thanks for the additional references. As you well note, Nasuia and the like are not beings able to live on their own and, consequently, not good first-cell candidates because of the lack of a host in historical first-cell conditions. Certainly, there was no E. Coli or similar back then, so your proposed mechanism puzzles me. I like the numerator idea better, and we don’t need an exact number; just an order of magnitude would suffice. Let me take a shot at it right here.

      Suppose the genome of a minimum-genome being can be as varied as that of fully evolved organism from the present, and further suppose that every individual living today has a different genome (a huge overestimation, but let’s follow it). According to this source, we have 5 * 10^30 bacteria living today. Say that archaea and eukaryotes are just as abundant; that gives us 1.5 * 10^31 variations that would go in the numerator of the last probability formula, replacing the 1. This factor will end up dividing the previously calculated time required by our simian team. The time required now to hit upon the genome of one living cell capable of further evolution becomes 2.2507 * 10^326801 seconds, or 5.77 * 10^326783 times the age of the universe.

      This still seems to me heavy odds against the spontaneous generation hypothesis. Other arguments I can think of in order to salvage it:

      1. We just happen to be living in the one universe where life began, the one that got lucky out of who knows how many. Appealing to many, but then the problem is punted into Cosmology: how do you get that many universes? Do we have any evidence of any universes existing besides our own?
      2. The first viable genetic code got assembled bit by bit on RNA (seems more likely than DNA) that underwent a sort of abiotic natural selection, perhaps in symbiosis with some proteins (this is typically added because no one believes RNA can do this alone). A container (RNA “membrane”?) is a must, otherwise all RNA molecules neighboring our champion would benefit from its superior ability to surround itself with helper molecules. Probability-wise, getting the first viable RNA and the first viable helper proteins and membrane elements is not too different from getting RNA that encodes all these components. The “natural selection” posited for this to work, however, seems to me rather hokey. How does a molecule gain any advantage over other molecules? Perhaps some incremental gains in stability, speed of self-replication? Then at the end of the process you’d get a sort of “RNA cancer molecule” that has nothing to do with the functions of a cell in a stable relationship with its environment. If the optimized RNA has less predatory tendencies, how does it manage to survive surrounded by molecules that are not so scrupulous?
      3. Life was seeded on earth by genetic material riding a meteorite. Again, this is punting on the question, making it harder to solve by traveling to an unknown environment that we have no reason to assume was friendlier to life. And the math would still be the same.

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